Index

A

annotate_denovo() (in module proteoclade.pcannotate)

annotate_peptides() (in module proteoclade.pcannotate)

C

create_pcdb() (in module proteoclade.pcdb)

D

db_fetch_params() (in module proteoclade.pcutilities) db_stats() (in module proteoclade.pcutilities) download_cRAP() (in module proteoclade.pcutilities)

download_taxonomy() (in module proteoclade.pcutilities) download_uniprot() (in module proteoclade.pcutilities) download_uniprot_batch() (in module proteoclade.pcutilities)

F

filter_taxa() (in module proteoclade.pcannotate)

L

load_taxonomy() (in module proteoclade.pcutilities)

M

merge_fastas() (in module proteoclade.pcdb) module proteoclade.pcannotate proteoclade.pcconstants proteoclade.pcdb proteoclade.pcquant proteoclade.pcutilities

N

ncbi_check() (in module proteoclade.pcutilities)

P

proteoclade.pcannotate module proteoclade.pcconstants module proteoclade.pcdb module

proteoclade.pcquant module proteoclade.pcutilities module

R

roll_up() (in module proteoclade.pcquant)